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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs418913 chr22:22365205 A/G SLC2A11 chr22:24198890-24228496:+ -0.64 -6.07 2.54E-9 Box Plot
THCA rs418913 chr22:22365205 A/G TNRC6B chr22:40440821-40731812:+ -0.48 -6.18 1.35E-9 Box Plot
THCA rs418913 chr22:22365205 A/G TUG1 chr22:31366663-31375381:+ -0.51 -5.91 6.45E-9 Box Plot
THCA rs4235667 chr5:72487764 A/T MPP5 chr14:67707826-67802536:+ 0.19 6.46 2.56E-10 Box Plot
THCA rs4235669 chr5:72491664 A/C MPP5 chr14:67707826-67802536:+ 0.17 5.88 7.57E-9 Box Plot
THCA rs4235927 chr6:158028970 A/G BTLA chr3:112182815-112218408:- 0.17 5.99 4.15E-9 Box Plot
THCA rs4236043 chr6:27204242 G/C ZNF322B chr9:99957633-99961910:- -0.4 -6.44 2.92E-10 Box Plot
THCA rs4236335 chr7:33067130 A/C FKBP9L chr7:55748767-55780945:- -0.41 -9.37 2.79E-19 Box Plot
THCA rs4237750 chr11:20246868 A/G SGK196 chr8:42948657-42978323:+ -0.18 -6.12 1.98E-9 Box Plot
THCA rs4240645 chr8:10254463 C/G SGK223 chr8:8175258-8244008:- 0.34 6.18 1.38E-9 Box Plot
THCA rs4240671 chr8:10767748 A/G SGK223 chr8:8175258-8244008:- -0.34 -6.77 3.89E-11 Box Plot
THCA rs4240672 chr8:10767917 G/A SGK223 chr8:8175258-8244008:- 0.34 6.83 2.6E-11 Box Plot
THCA rs4240673 chr8:10787612 T/C SGK223 chr8:8175258-8244008:- 0.37 7.24 1.81E-12 Box Plot
THCA rs4240674 chr8:10845652 T/C SGK223 chr8:8175258-8244008:- 0.39 6.99 9.56E-12 Box Plot
THCA rs4240678 chr8:11802426 C/T SGK223 chr8:8175258-8244008:- 0.38 6.94 1.32E-11 Box Plot